STRINGSTRING
PP1S34_112V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S34_112V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S34_112V6.1Predicted protein (247 aa)    
Predicted Functional Partners:
PP1S43_247V6.1
Predicted protein (475 aa)
   
  0.925
PP1S165_66V6.1
Predicted protein (474 aa)
   
  0.925
PP1S76_212V6.1
Predicted protein (171 aa)
   
 
  0.782
PP1S507_10V6.1
Annotation not available (216 aa)
   
 
  0.782
PP1S39_352V6.1
Predicted protein; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (173 aa)
   
 
  0.782
PP1S16_130V6.1
Annotation not available (479 aa)
   
 
  0.775
PP1S10_194V6.1
Predicted protein (487 aa)
   
 
  0.775
PP1S23_133V6.1
Annotation not available (944 aa)
   
 
  0.767
NBP35
Predicted protein; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. Functions as Fe-S scaffold, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins. Essential for embryo development (360 aa)
   
 
  0.725
PP1S414_7V6.1
Predicted protein (584 aa)
   
 
  0.725
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (13%) [HD]