• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S34_163V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S34_163V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S34_163V6.1Predicted protein (317 aa)    
Predicted Functional Partners:
3989049
Cytochrome c biogenesis factor N (743 aa)
 
 
  0.975
PP1S71_106V6.1
annotation not available (1179 aa)
       
 
  0.961
PP1S301_15V6.1
annotation not available (1238 aa)
       
 
  0.961
PP1S456_23V6.1
Predicted protein (521 aa)
   
 
  0.956
PP1S73_159V6.1
Predicted protein (692 aa)
           
  0.888
PP1S59_135V6.1
Uncharacterized protein (824 aa)
           
  0.887
PP1S55_97V6.1
Cytochrome c-type biogenesis protein (162 aa)
 
 
  0.874
PP1S58_262V6.1
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle (910 aa)
           
  0.848
PP1S243_64V6.1
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle (878 aa)
           
  0.848
PP1S149_273V6.1
Predicted protein (161 aa)
           
  0.797
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (9%) [HD]