STRINGSTRING
PP1S34_263V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S34_263V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S34_263V6.1Predicted protein (311 aa)    
Predicted Functional Partners:
PP1S72_31V6.1
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (173 aa)
   
  0.987
PP1S139_54V6.1
Annotation not available (106 aa)
   
  0.986
PP1S328_43V6.1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (114 aa)
     
  0.985
PP1S1_420V6.1
Predicted protein (541 aa)
     
  0.985
GTF1502.1
TATA-box binding protein, component of TFIID and TFIIIB (211 aa)
     
  0.985
GTF1502.2
TATA-box binding protein, component of TFIID and TFIIIB (265 aa)
     
  0.985
PP1S89_20V6.1
Predicted protein (142 aa)
     
  0.984
PP1S197_12V6.1
Predicted protein (145 aa)
     
  0.984
PP1S54_240V6.1
Predicted protein (483 aa)
     
  0.984
PP1S155_97V6.1
Predicted protein (284 aa)
     
  0.983
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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