STRINGSTRING
PP1S34_50V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S34_50V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S34_50V6.1Predicted protein (273 aa)    
Predicted Functional Partners:
PP1S227_66V6.1
Predicted protein (518 aa)
 
  0.998
PP1S12_40V6.1
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (426 aa)
 
  0.995
PP1S47_214V6.1
Predicted protein (646 aa)
 
 
  0.988
PP1S188_15V6.1
Predicted protein (646 aa)
 
 
  0.988
PP1S303_31V6.1
Annotation not available (91 aa)
 
  0.956
PP1S83_44V6.1
Predicted protein (388 aa)
   
  0.923
PP1S78_143V6.1
Predicted protein (425 aa)
   
  0.923
PP1S212_85V6.1
Predicted protein (366 aa)
   
  0.923
PP1S199_33V6.1
Predicted protein (378 aa)
   
  0.923
PP1S152_81V6.1
Predicted protein (367 aa)
   
  0.923
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (16%) [HD]