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STRINGSTRING
PP1S351_34V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S351_34V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S351_34V6.1annotation not available (383 aa)    
Predicted Functional Partners:
PP1S152_63V6.1
Intraflagellar transport protein IFT88 (867 aa)
     
 
  0.620
PP1S70_224V6.1
Intraflagellar transport protein IFT57 (431 aa)
     
   
  0.620
PP1S91_98V6.1
annotation not available (856 aa)
     
 
  0.601
PP1S64_14V6.1
Predicted protein (515 aa)
     
   
  0.566
PP1S344_19V6.1
PF16 central pair apparatus protein (309 aa)
     
   
  0.566
PP1S344_16V6.1
Predicted protein (147 aa)
     
   
  0.566
PP1S87_27V6.1
Intraflagellar transport protein IFT43 (280 aa)
     
   
  0.543
PP1S183_85V6.1
Predicted protein; Belongs to the protein kinase superfamily (293 aa)
     
 
  0.542
PP1S163_27V6.1
Predicted protein; Belongs to the protein kinase superfamily (293 aa)
     
 
  0.542
PP1S6_48V6.1
annotation not available (462 aa)
     
   
  0.541
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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