STRINGSTRING
PP1S355_18V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S355_18V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S355_18V6.1Predicted protein (496 aa)    
Predicted Functional Partners:
PP1S257_84V6.1
30S ribosomal protein S15 (245 aa)
     
      0.694
PP1S114_90V6.1
Predicted protein (346 aa)
     
      0.666
rps2
30S ribosomal protein S2, chloroplastic (236 aa)
     
      0.664
PP1S15_233V6.1
Predicted protein (715 aa)
     
 
  0.630
PP1S12_309V6.1
Predicted protein (495 aa)
     
 
  0.609
PP1S17_13V6.1
Predicted protein (339 aa)
     
 
  0.605
PP1S337_11V6.1
Predicted protein (258 aa)
     
      0.595
PP1S168_95V6.1
Predicted protein; Methylates the 2’-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs (295 aa)
     
   
  0.593
PP1S199_88V6.1
Annotation not available (219 aa)
     
      0.585
PP1S128_49V6.1
Predicted protein (225 aa)
     
      0.585
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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