STRINGSTRING
PP1S355_66V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S355_66V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S355_66V6.1Predicted protein (868 aa)    
Predicted Functional Partners:
PP1S30_74V6.1
Predicted protein (275 aa)
       
 
  0.864
PP1S294_68V6.1
Predicted protein (184 aa)
       
 
  0.864
PP1S105_9V6.1
Predicted protein (197 aa)
       
 
  0.864
PP1S105_12V6.1
Predicted protein (197 aa)
       
 
  0.864
PP1S60_107V6.1
Predicted protein (665 aa)
       
 
  0.556
PP1S43_18V6.1
Sensory histidine protein kinase (745 aa)
     
 
0.556
PP1S9_92V6.1
Annotation not available (566 aa)
       
 
  0.521
PP1S455_2V6.1
Thioredoxin reductase (573 aa)
       
 
  0.521
PP1S99_26V6.1
Predicted protein (648 aa)
       
 
  0.512
PP1S88_14V6.1
Predicted protein (159 aa)
       
 
  0.512
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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