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STRINGSTRING
PP1S35_287V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S35_287V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S35_287V6.1annotation not available (556 aa)    
Predicted Functional Partners:
HAG1502
Elongator complex protein 3; Catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (569 aa)
     
   
  0.939
PP1S167_46V6.1
annotation not available (552 aa)
     
   
  0.939
PP1S52_170V6.1
Predicted protein (182 aa)
 
 
        0.918
PP1S39_104V6.1
Predicted protein (744 aa)
           
  0.918
PP1S136_220V6.1
Predicted protein (260 aa)
   
   
  0.906
PP1S391_10V6.1
annotation not available (224 aa)
   
        0.902
PP1S32_260V6.1
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family (332 aa)
   
        0.902
PP1S112_134V6.1
annotation not available (402 aa)
   
        0.902
PP1S431_6V6.2
Predicted protein (843 aa)
     
 
  0.897
PP1S431_2V6.2
Predicted protein (843 aa)
     
 
  0.897
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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