STRINGSTRING
PP1S362_27V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S362_27V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S362_27V6.1Predicted protein (738 aa)    
Predicted Functional Partners:
PP1S8174_1V6.1
Predicted protein (379 aa)
     
 
  0.928
PP1S10650_1V6.1
Predicted protein (134 aa)
     
 
  0.928
PP1S8360_1V6.1
Predicted protein (283 aa)
       
 
  0.925
PP1S61_255V6.3
Predicted protein (571 aa)
       
 
  0.925
PP1S22_38V6.1
Predicted protein (561 aa)
       
 
  0.925
PP1S370_61V6.1
Predicted protein (670 aa)
     
      0.922
PP1S178_144V6.1
Predicted protein (354 aa)
     
      0.922
PP1S44_240V6.1
Annotation not available (1095 aa)
   
  0.921
PP1S7_147V6.1
Predicted protein (485 aa)
       
 
  0.920
PP1S526_11V6.2
Predicted protein (570 aa)
       
 
  0.920
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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