STRINGSTRING
PP1S367_9V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S367_9V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S367_9V6.1Annotation not available (297 aa)    
Predicted Functional Partners:
PP1S54_278V6.1
Predicted protein (512 aa)
   
          0.507
PP1S52_90V6.1
Predicted protein (203 aa)
   
          0.505
PP1S118_236V6.1
Annotation not available (305 aa)
   
          0.496
PP1S62_200V6.1
Annotation not available (302 aa)
   
          0.491
PP1S132_52V6.1
Annotation not available (650 aa)
   
          0.484
PP1S104_98V6.1
Predicted protein (360 aa)
   
          0.477
PP1S72_288V6.1
Predicted protein (317 aa)
   
          0.473
PP1S267_18V6.1
Annotation not available (277 aa)
   
          0.464
PP1S98_136V6.1
Predicted protein (177 aa)
   
          0.461
PP1S96_134V6.1
Predicted protein (585 aa)
   
          0.460
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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