STRINGSTRING
PP1S368_6V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S368_6V6.1" - Predicted protein in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S368_6V6.1Predicted protein (1222 aa)    
Predicted Functional Partners:
PP1S114_86V6.1
Predicted protein (741 aa)
           
  0.474
PP1S58_120V6.1
Predicted protein (122 aa)
           
  0.424
PP1S83_180V6.1
Annotation not available (842 aa)
     
   
  0.407
PP1S355_18V6.1
Predicted protein (496 aa)
           
  0.407
PP1S183_63V6.1
Predicted protein (512 aa)
           
  0.407
PP1S17_13V6.1
Predicted protein (339 aa)
           
  0.407
PP1S173_64V6.1
Predicted protein; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding (485 aa)
           
  0.407
PP1S168_95V6.1
Predicted protein; Methylates the 2’-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs (295 aa)
           
  0.407
PP1S15_233V6.1
Predicted protein (715 aa)
           
  0.407
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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