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PP1S369_5V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S369_5V6.1" - GTPase Der in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S369_5V6.1GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis (572 aa)    
Predicted Functional Partners:
PP1S4_383V6.1
Predicted protein (823 aa)
   
 
  0.965
PP1S382_28V6.1
Predicted protein (288 aa)
   
   
  0.956
PP1S72_188V6.3
Predicted protein (385 aa)
   
 
  0.928
PP1S54_13V6.1
Predicted protein (356 aa)
   
 
  0.928
PP1S38_335V6.1
Predicted protein (386 aa)
   
 
  0.928
PP1S34_36V6.1
Predicted protein (486 aa)
   
 
  0.928
PP1S15_355V6.1
annotation not available (380 aa)
   
 
  0.928
PP1S15_354V6.1
Predicted protein (385 aa)
   
 
  0.928
PP1S75_41V6.1
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family (1006 aa)
   
   
  0.714
PP1S38_176V6.1
Predicted protein (1141 aa)
   
   
  0.714
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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