STRINGSTRING
PP1S36_103V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S36_103V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S36_103V6.1Predicted protein (570 aa)    
Predicted Functional Partners:
PP1S312_18V6.2
annotation not available (576 aa)
     
 
  0.999
PP1S17_107V6.1
Predicted protein (433 aa)
     
  0.999
PP1S29_309V6.1
Predicted protein (736 aa)
     
 
  0.997
PP1S9_445V6.1
annotation not available (767 aa)
     
 
  0.990
PP1S31_181V6.2
Predicted protein (1479 aa)
     
 
  0.985
PP1S136_136V6.1
annotation not available (1560 aa)
     
 
  0.985
PP1S61_42V6.1
Predicted protein (1457 aa)
     
 
  0.984
PP1S141_20V6.1
Predicted protein (675 aa)
     
 
  0.969
PP1S197_75V6.1
Predicted protein (677 aa)
     
 
  0.965
PP1S27_374V6.1
Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3’-end formation (443 aa)
     
 
  0.962
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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