STRINGSTRING
PP1S36_350V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S36_350V6.1" - Annotation not available in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S36_350V6.1Annotation not available (371 aa)    
Predicted Functional Partners:
PP1S38_176V6.1
Predicted protein (1141 aa)
       
      0.874
PP1S15_233V6.1
Predicted protein (715 aa)
       
      0.655
PP1S12_309V6.1
Predicted protein (495 aa)
       
      0.655
PP1S46_194V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
       
 
  0.650
PP1S227_112V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (224 aa)
       
 
  0.650
PP1S75_41V6.1
Predicted protein (1006 aa)
       
      0.641
PP1S17_107V6.1
Predicted protein (433 aa)
     
   
  0.423
PP1S98_229V6.1
Predicted protein (551 aa)
           
  0.407
PP1S98_213V6.1
Predicted protein (551 aa)
           
  0.407
PP1S93_49V6.1
Annotation not available (239 aa)
           
  0.407
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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