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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S371_10V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S371_10V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S371_10V6.1Predicted protein (253 aa)    
Predicted Functional Partners:
PP1S50_192V6.1
annotation not available (636 aa)
     
 
  0.938
PP1S144_165V6.1
annotation not available (206 aa)
     
 
  0.938
HDA1504
Histone deacetylase ; Belongs to the histone deacetylase family. HD Type 1 subfamily (723 aa)
     
 
  0.861
HDA1505
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily (774 aa)
     
 
  0.861
SWDB1502
Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 (328 aa)
   
 
  0.806
SWDB1501
Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 (328 aa)
   
 
  0.805
PP1S24_221V6.1
annotation not available (940 aa)
     
 
  0.801
HMTA1501
Histone H3 methyltransferase complex, subunit CPS60/ASH2/BRE2 (638 aa)
     
 
  0.799
HMTA1502
annotation not available (338 aa)
     
 
  0.799
PP1S42_67V6.1
annotation not available (2040 aa)
       
 
  0.783
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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