STRINGSTRING
PP1S372_1V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S372_1V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S372_1V6.1Predicted protein (439 aa)    
Predicted Functional Partners:
PP1S10_34V6.1
Predicted protein (1135 aa)
     
 
  0.945
PP1S44_261V6.1
Annotation not available (382 aa)
         
  0.907
PP1S18_57V6.1
Predicted protein (371 aa)
         
  0.907
PP1S8_84V6.1
Predicted protein (429 aa)
         
 
0.800
PP1S100_54V6.1
Predicted protein (447 aa)
           
  0.568
PP1S269_66V6.1
Predicted protein (595 aa)
           
  0.508
PP1S151_12V6.1
Predicted protein (437 aa)
     
   
  0.490
PP1S31_233V6.1
Predicted protein (533 aa)
     
   
  0.489
PP1S246_61V6.1
Predicted protein (369 aa)
           
  0.487
PP1S329_23V6.1
Predicted protein (806 aa)
           
  0.431
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (1%) [HD]