• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S372_34V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S372_34V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S372_34V6.1annotation not available (495 aa)    
Predicted Functional Partners:
PP1S58_225V6.1
annotation not available (364 aa)
   
          0.440
PP1S303_51V6.1
Predicted protein (267 aa)
   
          0.433
PP1S57_133V6.1
Predicted protein (400 aa)
   
          0.431
PP1S327_34V6.1
annotation not available (593 aa)
   
          0.430
PP1S114_22V6.1
Predicted protein (375 aa)
   
          0.429
PP1S303_58V6.1
Predicted protein (402 aa)
   
          0.409
PP1S49_135V6.1
annotation not available (478 aa)
   
          0.407
PP1S118_117V6.1
annotation not available (244 aa)
   
          0.403
PP1S222_101V6.1
Predicted protein (425 aa)
   
          0.402
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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