• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S376_42V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S376_42V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S376_42V6.1Predicted protein (306 aa)    
Predicted Functional Partners:
PP1S336_16V6.2
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family (597 aa)
     
 
  0.920
3989066
Predicted protein; Belongs to the universal ribosomal protein uL16 family (561 aa)
   
      0.836
PP1S51_241V6.1
annotation not available (380 aa)
     
 
  0.828
PP1S54_95V6.1
Predicted protein (358 aa)
     
 
  0.674
PP1S297_1V6.1
Predicted protein (363 aa)
     
 
  0.674
PP1S197_88V6.1
annotation not available (378 aa)
     
 
  0.674
PP1S14_29V6.1
Predicted protein (362 aa)
     
 
  0.674
PP1S163_26V6.2
Predicted protein (583 aa)
         
  0.673
PP1S97_272V6.1
Predicted protein; Belongs to the universal ribosomal protein uS15 family (151 aa)
   
 
  0.664
PP1S45_268V6.1
Predicted protein; Belongs to the universal ribosomal protein uS15 family (75 aa)
   
 
  0.664
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (17%) [HD]