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STRINGSTRING
PP1S376_49V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S376_49V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S376_49V6.1Predicted protein (455 aa)    
Predicted Functional Partners:
PP1S286_43V6.1
Predicted protein (592 aa)
           
  0.703
PP1S195_72V6.1
Predicted protein (357 aa)
           
  0.620
PP1S10_392V6.2
Predicted protein (362 aa)
           
  0.620
PP1S71_240V6.1
Predicted protein (2274 aa)
           
  0.619
PP1S20_50V6.1
annotation not available (2209 aa)
           
  0.619
PP1S39_426V6.2
Ribulose-phosphate 3-epimerase ; Belongs to the ribulose-phosphate 3-epimerase family (287 aa)
           
  0.597
PP1S38_198V6.1
Predicted protein (295 aa)
           
  0.597
PP1S2_15V6.2
Ribulose-phosphate 3-epimerase ; Belongs to the ribulose-phosphate 3-epimerase family (286 aa)
           
  0.597
PP1S305_4V6.1
annotation not available (192 aa)
           
  0.515
PP1S17_279V6.1
Predicted protein (391 aa)
           
  0.515
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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