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PP1S379_19V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S379_19V6.1" - UDP-apiose/UDP-xylose synthase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S379_19V6.1UDP-apiose/UDP-xylose synthase (385 aa)    
Predicted Functional Partners:
PP1S49_270V6.1
UDP-glucose 6-dehydrogenase (480 aa)
   
 
  0.960
PP1S365_31V6.1
UDP-glucose 6-dehydrogenase (481 aa)
   
 
  0.960
PP1S334_84V6.1
UDP-glucose 6-dehydrogenase (480 aa)
   
 
  0.960
PP1S134_169V6.1
UDP-glucose 6-dehydrogenase (480 aa)
   
 
  0.960
PP1S91_143V6.1
Predicted protein (435 aa)
   
  0.932
PP1S52_81V6.3
Predicted protein (446 aa)
   
  0.932
PP1S46_116V6.1
Predicted protein (450 aa)
   
  0.932
PP1S38_222V6.2
Predicted protein (570 aa)
   
  0.932
PP1S2_497V6.1
Predicted protein (468 aa)
   
  0.932
PP1S298_54V6.1
Predicted protein (472 aa)
   
  0.932
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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