STRINGSTRING
PP1S37_67V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S37_67V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S37_67V6.2Predicted protein (203 aa)    
Predicted Functional Partners:
PP1S196_105V6.1
Annotation not available (1014 aa)
              0.795
PP1S137_132V6.1
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (1008 aa)
              0.795
PP1S44_240V6.1
Annotation not available (1095 aa)
     
 
  0.779
PP1S201_7V6.2
Predicted protein (275 aa)
       
 
  0.737
PP1S245_93V6.1
Annotation not available (977 aa)
       
      0.734
PP1S367_3V6.1
Predicted protein (246 aa)
       
    0.699
PP1S190_85V6.1
Predicted protein (256 aa)
       
    0.699
PP1S116_104V6.1
Annotation not available (363 aa)
       
      0.655
PP1S431_6V6.2
Predicted protein (843 aa)
     
  0.654
PP1S431_2V6.2
Predicted protein (843 aa)
     
  0.654
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (5%) [HD]