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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S37_82V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S37_82V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S37_82V6.1annotation not available (483 aa)    
Predicted Functional Partners:
PP1S258_78V6.1
Predicted protein (438 aa)
     
   
  0.999
PP1S12_184V6.1
annotation not available (736 aa)
           
  0.984
PP1S169_131V6.1
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1200 aa)
     
      0.894
PP1S42_67V6.1
annotation not available (2040 aa)
     
 
  0.700
PP1S138_176V6.1
Predicted protein (2032 aa)
     
 
  0.700
PGE1501
Transcriptional repressor EED/ESC/FIE (376 aa)
     
 
  0.656
PP1S98_145V6.1
Predicted protein (1099 aa)
           
  0.621
PP1S926_1V6.1
Predicted protein (977 aa)
           
  0.621
PP1S237_54V6.1
Predicted protein (1058 aa)
           
  0.621
PP1S325_74V6.1
annotation not available (1709 aa)
     
 
  0.598
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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