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STRINGSTRING
PP1S381_17V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S381_17V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S381_17V6.1Predicted protein (527 aa)    
Predicted Functional Partners:
PP1S8_116V6.1
Predicted protein (617 aa)
     
 
  0.990
PP1S137_78V6.1
Predicted protein (419 aa)
   
 
  0.984
PP1S98_142V6.1
Predicted protein (386 aa)
     
 
  0.982
PP1S332_22V6.1
Predicted protein (419 aa)
   
   
  0.980
PP1S15_445V6.1
Predicted protein; Belongs to the SecY/SEC61-alpha family (543 aa)
     
 
  0.975
PP1S6_202V6.1
Predicted protein (217 aa)
   
 
  0.968
PP1S190_86V6.1
Predicted protein (431 aa)
     
 
  0.966
PP1S3_351V6.1
Predicted protein (317 aa)
     
 
  0.948
PP1S367_8V6.1
Predicted protein (306 aa)
     
 
  0.948
PP1S12_290V6.1
Predicted protein (331 aa)
     
 
  0.948
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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