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STRINGSTRING
PP1S387_49V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S387_49V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S387_49V6.1Predicted protein (554 aa)    
Predicted Functional Partners:
PP1S75_175V6.1
Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family (720 aa)
     
 
  0.640
PP1S283_76V6.1
Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family (726 aa)
     
 
  0.640
PP1S165_33V6.1
Predicted protein (732 aa)
     
 
  0.640
PP1S28_399V6.1
Uncharacterized protein (320 aa)
         
  0.587
PP1S1_376V6.1
Uncharacterized protein (363 aa)
         
  0.582
PP1S33_59V6.1
Predicted protein (826 aa)
   
   
  0.572
PP1S275_66V6.1
Predicted protein (823 aa)
   
   
  0.572
PP1S12_187V6.1
Predicted protein (287 aa)
   
   
  0.553
PP1S111_62V6.1
Predicted protein (273 aa)
           
  0.551
PP1S25_162V6.1
Predicted protein (482 aa)
   
   
  0.550
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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