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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S387_58V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S387_58V6.2" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S387_58V6.2annotation not available (237 aa)    
Predicted Functional Partners:
PP1S203_65V6.1
Predicted protein (701 aa)
     
      0.845
PP1S220_98V6.1
annotation not available (599 aa)
           
  0.615
PP1S79_2V6.3
annotation not available (340 aa)
           
  0.612
PP1S39_161V6.1
annotation not available (238 aa)
           
  0.612
PP1S362_21V6.1
annotation not available (548 aa)
           
  0.575
PP1S34_360V6.1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (632 aa)
           
  0.532
PP1S7050_1V6.1
Predicted protein (368 aa)
           
  0.525
MBD1501
Uncharacterized protein (300 aa)
           
  0.524
PP1S107_194V6.1
Predicted protein (140 aa)
         
  0.520
PP1S93_123V6.1
Predicted protein (1839 aa)
           
  0.519
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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