STRINGSTRING
BOR1 protein (Physcomitrella patens) - STRING interaction network
"BOR1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BOR1Predicted protein (684 aa)    
Predicted Functional Partners:
PP1S4335_1V6.1
Aspartokinase (217 aa)
       
      0.878
PP1S286_35V6.2
Aspartokinase (578 aa)
       
      0.878
PP1S162_64V6.1
Aspartokinase (577 aa)
       
      0.878
PP1S88_62V6.1
Predicted protein (930 aa)
       
      0.667
PP1S194_198V6.1
Predicted protein (924 aa)
       
      0.667
PP1S169_77V6.1
Annotation not available (652 aa)
       
      0.667
PP1S391_30V6.1
Predicted protein (182 aa)
       
      0.653
PP1S336_27V6.1
Annotation not available (94 aa)
       
      0.653
PP1S336_26V6.1
Predicted protein (742 aa)
       
      0.653
PP1S30_346V6.1
Predicted protein (234 aa)
       
      0.653
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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