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STRINGSTRING
PP1S38_251V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S38_251V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S38_251V6.1annotation not available (291 aa)    
Predicted Functional Partners:
PP1S1362_2V6.1
Predicted protein (305 aa)
   
   
  0.563
PP1S91_78V6.1
Predicted protein (473 aa)
         
  0.550
PP1S329_23V6.1
Predicted protein (806 aa)
           
  0.532
PP1S104_135V6.1
Predicted protein (311 aa)
   
 
  0.525
PP1S8_260V6.1
Predicted protein (826 aa)
     
   
  0.522
PP1S55_173V6.1
Predicted protein (826 aa)
     
   
  0.522
PP1S477_5V6.1
Predicted protein (483 aa)
           
  0.519
PP1S44_144V6.1
annotation not available (446 aa)
     
   
  0.510
PP1S98_119V6.1
annotation not available (1387 aa)
           
  0.499
PP1S7_49V6.2
annotation not available (778 aa)
           
  0.499
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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