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STRINGSTRING
PP1S38_63V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S38_63V6.1" - Annexin in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S38_63V6.1Annexin (395 aa)    
Predicted Functional Partners:
PP1S641_1V6.1
Predicted protein (807 aa)
       
      0.607
PP1S185_2V6.1
Predicted protein (142 aa)
           
  0.602
PP1S254_32V6.1
Predicted protein (220 aa)
           
  0.503
PP1S31_220V6.1
Serine/threonine-protein phosphatase (303 aa)
           
  0.491
PP1S207_36V6.1
Serine/threonine-protein phosphatase (303 aa)
           
  0.491
PP1S355_13V6.1
Predicted protein (483 aa)
       
 
  0.433
PP1S246_62V6.1
annotation not available (407 aa)
       
 
  0.433
PP1S21_271V6.1
annotation not available (1852 aa)
           
  0.433
PP1S24_151V6.1
V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (383 aa)
           
  0.431
PP1S158_12V6.1
V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (378 aa)
           
  0.431
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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