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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S391_11V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S391_11V6.1" - Vacuolar ATPase assembly integral membrane protein VMA21 homolog in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PP1S391_11V6.1Vacuolar ATPase assembly integral membrane protein VMA21 homolog; Required for the assembly of the V0 complex of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum (111 aa)    
Predicted Functional Partners:
PP1S68_228V6.1
annotation not available (216 aa)
           
  0.887
PP1S54_7V6.1
Ctr family transporter (162 aa)
           
  0.592
PP1S130_87V6.1
Ctr family copper transporter (139 aa)
           
  0.592
PP1S438_14V6.1
Predicted protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family (521 aa)
           
  0.549
PP1S334_41V6.1
Predicted protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family (501 aa)
           
  0.549
PP1S101_18V6.1
Predicted protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family (493 aa)
           
  0.549
PP1S40_4V6.2
annotation not available (439 aa)
           
  0.526
PP1S32_217V6.1
annotation not available (439 aa)
           
  0.526
PP1S8_312V6.1
Predicted protein (623 aa)
           
  0.503
PP1S44_102V6.1
annotation not available (623 aa)
           
  0.503
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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