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STRINGSTRING
PP1S391_25V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S391_25V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S391_25V6.1Predicted protein (1069 aa)    
Predicted Functional Partners:
PP1S9_100V6.1
annotation not available (294 aa)
     
 
  0.964
PP1S387_53V6.1
Serine/threonine-protein phosphatase (304 aa)
     
 
  0.924
PP1S212_18V6.1
Serine/threonine-protein phosphatase (304 aa)
     
 
  0.924
PP1S226_56V6.1
Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (348 aa)
       
 
  0.888
PP1S111_153V6.1
Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (406 aa)
       
 
  0.888
GTA1501
RNA polymerase II transcription elongation factor SPT5 (1070 aa)
     
      0.624
PP1S144_35V6.1
annotation not available (1060 aa)
     
      0.624
PP1S2_670V6.1
Predicted protein (189 aa)
     
      0.623
PP1S77_262V6.1
annotation not available (2787 aa)
     
 
  0.621
PP1S67_9V6.1
Predicted protein (312 aa)
     
 
  0.608
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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