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SLY1PS protein (Physcomitrella patens) - STRING interaction network
"SLY1PS" - SM/Sec1-family protein-like protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLY1PSSM/Sec1-family protein-like protein (318 aa)    
Predicted Functional Partners:
SYP3A1
Qa-SNARE, SYP3/Sed5p/Syntaxin 5-type (357 aa)
     
  0.984
SYP3A2
Qa-SNARE, SYP3/Sed5p/Syntaxin 5-type (355 aa)
     
  0.984
SEC22A2-1
R-SNARE, SEC22-family (219 aa)
     
  0.983
SEC22
R-SNARE, SEC22-family (219 aa)
     
  0.983
PP1S376_45V6.1
Predicted protein (975 aa)
     
  0.982
PP1S75_117V6.1
Annotation not available (259 aa)
     
  0.982
PP1S75_114V6.1
Predicted protein (96 aa)
     
  0.982
MEMB1A2
Qb-SNARE, MEMB1-family (248 aa)
     
  0.982
BET1A2
Qc-SNARE, BET1-family (123 aa)
     
  0.981
BET1A1
Qc-SNARE, BET1-family (125 aa)
     
  0.981
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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