• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S392_8V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S392_8V6.2" - Methionine aminopeptidase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S392_8V6.2Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (386 aa)    
Predicted Functional Partners:
PP1S17_285V6.1
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (479 aa)
     
 
  0.949
PP1S17_278V6.1
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (481 aa)
     
 
  0.949
PP1S9_141V6.1
annotation not available (1040 aa)
   
   
  0.900
3989066
Predicted protein; Belongs to the universal ribosomal protein uL16 family (561 aa)
   
 
  0.889
PP1S294_14V6.1
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (434 aa)
     
 
  0.788
PP1S268_3V6.1
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins (304 aa)
   
   
  0.759
PP1S47_85V6.1
Predicted protein (595 aa)
     
 
  0.726
PP1S34_360V6.1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (632 aa)
   
   
  0.720
PP1S286_15V6.1
Predicted protein (820 aa)
     
 
  0.712
PP1S37_98V6.1
Predicted protein (226 aa)
     
 
  0.701
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (8%) [HD]