• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S395_52V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S395_52V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S395_52V6.1Predicted protein (297 aa)    
Predicted Functional Partners:
PP1S316_17V6.1
Predicted protein (243 aa)
       
 
  0.645
PP1S184_72V6.1
Predicted protein (828 aa)
       
 
  0.635
FTR2
Ferric iron permease FTR1-like protein (311 aa)
         
  0.598
FTR1
Iron permease, FTR1-like protein (303 aa)
         
  0.598
PP1S251_9V6.1
High affinity ferric iron permease (269 aa)
         
  0.598
PP1S80_108V6.1
Predicted protein; Belongs to the mitochondrial carrier (TC 2.A.29) family (299 aa)
       
 
  0.586
PP1S532_6V6.1
Predicted protein; Belongs to the mitochondrial carrier (TC 2.A.29) family (348 aa)
       
 
  0.586
PP1S370_67V6.1
annotation not available (174 aa)
       
 
  0.586
PP1S30_333V6.1
annotation not available (315 aa)
   
 
  0.564
PP1S102_71V6.2
Predicted protein (468 aa)
   
 
  0.564
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (11%) [HD]