STRINGSTRING
SC37 protein (Physcomitrella patens) - STRING interaction network
"SC37" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SC37Predicted protein (319 aa)    
Predicted Functional Partners:
PP1S332_29V6.1
Annotation not available (227 aa)
     
  0.985
PP1S207_102V6.1
Predicted protein (210 aa)
     
  0.985
PP1S65_286V6.1
Annotation not available (346 aa)
     
  0.984
PP1S9_310V6.4
Annotation not available (245 aa)
     
  0.984
PP1S7_8V6.1
Predicted protein (349 aa)
     
  0.983
PP1S28_193V6.1
Uncharacterized protein (355 aa)
     
  0.983
PP1S173_12V6.1
Annotation not available (333 aa)
     
  0.983
PP1S69_23V6.1
Annotation not available (464 aa)
     
0.976
PP1S70_106V6.1
Predicted protein (533 aa)
     
  0.931
PP1S169_60V6.1
Predicted protein (258 aa)
   
 
 
0.926
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (10%) [HD]