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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S3_18V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S3_18V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S3_18V6.1Predicted protein (372 aa)    
Predicted Functional Partners:
PP1S229_18V6.1
Predicted protein (401 aa)
     
 
  0.995
PP1S68_100V6.1
annotation not available (175 aa)
     
 
  0.992
PP1S34_439V6.1
Predicted protein (298 aa)
     
 
  0.992
PP1S90_192V6.1
Predicted protein (439 aa)
     
 
  0.991
PP1S124_47V6.1
Predicted protein (439 aa)
     
 
  0.991
PP1S105_216V6.1
Predicted protein (439 aa)
     
 
  0.991
PP1S70_168V6.1
Predicted protein (386 aa)
     
 
  0.979
PP1S58_47V6.1
Predicted protein (386 aa)
     
 
  0.979
PP1S160_63V6.1
annotation not available (186 aa)
     
 
  0.979
PP1S31_338V6.1
Predicted protein (426 aa)
     
 
  0.973
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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