STRINGSTRING
PP1S3_199V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S3_199V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S3_199V6.1Annotation not available (612 aa)    
Predicted Functional Partners:
PP1S144_96V6.1
Predicted protein (372 aa)
   
 
  0.749
PP1S390_12V6.1
Predicted protein (388 aa)
   
 
  0.748
PP1S4666_1V6.1
Predicted protein (238 aa)
     
 
  0.686
PP1S70_132V6.1
Predicted protein (571 aa)
   
   
0.651
PP1S152_130V6.1
Predicted protein (262 aa)
 
          0.634
PP1S9176_1V6.1
Predicted protein (206 aa)
 
          0.616
PP1S3023_2V6.1
Predicted protein (262 aa)
         
  0.548
PP1S26_48V6.1
Predicted protein (371 aa)
         
  0.531
PP1S44_240V6.1
Annotation not available (1095 aa)
       
  0.501
PP1S99_248V6.1
Predicted protein (899 aa)
 
   
  0.477
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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