STRINGSTRING
NFA1503 protein (Physcomitrella patens) - STRING interaction network
"NFA1503" - Nucleosome assembly protein family in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFA1503Nucleosome assembly protein family (264 aa)    
Predicted Functional Partners:
PP1S113_126V6.1
Annotation not available (387 aa)
     
 
  0.860
NFA1501
Nucleosome assembly protein family (393 aa)
     
 
0.776
NFA1502
Nucleosome assembly protein family (367 aa)
     
 
0.774
SGA1502
Histone chaperone (239 aa)
     
 
  0.738
SGA1501
Histone chaperone (205 aa)
     
 
  0.738
SGA1504
Histone chaperone (207 aa)
     
 
  0.738
SGA1503
Histone chaperone (242 aa)
     
 
  0.738
NFB1501
Chromatin assembly complex 1 subunit B/CAC2 (606 aa)
     
 
  0.723
PP1S398_32V6.1
Predicted protein (448 aa)
     
  0.690
PP1S119_108V6.1
Predicted protein (344 aa)
     
  0.690
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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