STRINGSTRING
PP1S3_460V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S3_460V6.1" - Ribulose-phosphate 3-epimerase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S3_460V6.1Ribulose-phosphate 3-epimerase (237 aa)    
Predicted Functional Partners:
PP1S72_25V6.1
Predicted protein (751 aa)
   
  0.994
PP1S213_103V6.1
Predicted protein (831 aa)
   
  0.994
PP1S120_164V6.1
Predicted protein (748 aa)
   
  0.994
PP1S218_93V6.1
Predicted protein (320 aa)
   
  0.977
PP1S15_182V6.1
Predicted protein (355 aa)
   
  0.977
PP1S106_185V6.1
Predicted protein (317 aa)
   
  0.977
PP1S299_3V6.1
Phosphoribulokinase (423 aa)
   
 
  0.977
PP1S20_273V6.1
Phosphoribulokinase (426 aa)
   
 
  0.977
PP1S66_184V6.1
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH (500 aa)
   
  0.967
PP1S450_31V6.1
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH (506 aa)
   
  0.967
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (4%) [HD]