STRINGSTRING
PP1S3_582V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S3_582V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S3_582V6.2Predicted protein (503 aa)    
Predicted Functional Partners:
PP1S391_32V6.1
Predicted protein; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (289 aa)
 
        0.716
PP1S347_26V6.1
Annotation not available (305 aa)
 
        0.715
PP1S46_63V6.1
Predicted protein (610 aa)
              0.639
PP1S35_384V6.1
Predicted protein (610 aa)
              0.639
PP1S9_441V6.1
Annotation not available (313 aa)
   
        0.525
PP1S270_51V6.1
Annotation not available (1064 aa)
   
        0.525
PP1S14_131V6.1
Predicted protein (1104 aa)
   
        0.525
PP1S10_252V6.1
Predicted protein (1043 aa)
   
        0.525
PP1S91_247V6.1
Malate dehydrogenase (345 aa)
   
        0.514
PP1S79_110V6.1
Malate dehydrogenase (414 aa)
   
        0.514
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (7%) [HD]