STRINGSTRING
PP1S3_586V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S3_586V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S3_586V6.1Annotation not available (1474 aa)    
Predicted Functional Partners:
PP1S294_54V6.1
Annotation not available (137 aa)
   
  0.860
PP1S7011_1V6.1
Predicted protein (161 aa)
   
  0.821
PP1S143_51V6.1
Annotation not available (172 aa)
   
  0.821
ppabca3
ATP-binding cassette transporter, subfamily A, member 3, group ATH protein PpABCA3 (812 aa)
   
  0.821
PP1S4_481V6.1
Annotation not available (1227 aa)
   
0.789
ppabcg25
ATP-binding cassette transporter, subfamily G, member 25, group WBC protein PpABCG25 (1150 aa)
   
0.789
ppabcg24
ATP-binding cassette transporter, subfamily G, member 24, group WBC protein PpABCG24 (1093 aa)
   
0.789
PP1S66_62V6.1
Annotation not available (1010 aa)
   
0.787
ppabcg29
ATP-binding cassette transporter, subfamily G, member 29, group WBC protein PpABCG29 (796 aa)
   
0.786
PP1S138_50V6.1
Annotation not available (777 aa)
   
0.785
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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