STRINGSTRING
PP1S3_624V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S3_624V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S3_624V6.1Annotation not available (218 aa)    
Predicted Functional Partners:
PP1S26_47V6.1
Predicted protein; Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes (394 aa)
     
 
  0.846
PP1S223_105V6.3
Predicted protein (398 aa)
     
 
  0.843
PP1S314_33V6.1
Predicted protein (334 aa)
       
 
  0.819
PP1S271_46V6.1
Annotation not available (313 aa)
       
 
  0.819
PP1S59_304V6.1
Annotation not available (84 aa)
       
 
  0.806
PP1S358_23V6.1
Predicted protein (263 aa)
       
 
  0.806
PP1S150_16V6.1
Predicted protein (763 aa)
     
 
  0.730
PP1S60_178V6.1
Predicted protein (319 aa)
     
 
  0.698
PP1S54_102V6.1
Predicted protein (169 aa)
     
 
  0.698
PP1S38_282V6.1
Dynamin-related protein 5B-3 (976 aa)
     
 
  0.686
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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