• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S400_19V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S400_19V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S400_19V6.1Predicted protein (1144 aa)    
Predicted Functional Partners:
PP1S42_92V6.1
Predicted protein (410 aa)
     
      0.826
PP1S7_418V6.1
Uncharacterized protein (395 aa)
     
      0.800
PP1S58_197V6.1
Predicted protein (396 aa)
     
      0.800
PP1S58_262V6.1
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle (910 aa)
     
   
  0.611
PP1S243_64V6.1
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle (878 aa)
     
   
  0.611
PP1S158_178V6.1
annotation not available (1731 aa)
     
   
  0.571
PP1S59_319V6.1
Uncharacterized protein (198 aa)
           
  0.567
PP1S31_164V6.1
Cysteine protease (386 aa)
     
   
  0.564
PP1S130_263V6.1
Cysteine protease (386 aa)
     
   
  0.564
PP1S517_5V6.1
annotation not available (702 aa)
           
  0.563
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (8%) [HD]