STRINGSTRING
PP1S406_8V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S406_8V6.1" - Annotation not available in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S406_8V6.1Annotation not available (523 aa)    
Predicted Functional Partners:
PP1S187_53V6.1
Predicted protein (222 aa)
     
      0.938
PP1S251_17V6.1
Annotation not available (557 aa)
   
   
  0.598
PP1S251_19V6.1
Predicted protein (557 aa)
   
   
  0.598
PP1S391_10V6.1
rRNA adenine N(6)-methyltransferase (224 aa)
   
   
  0.573
PP1S32_260V6.1
Predicted protein (332 aa)
   
   
  0.573
PP1S112_134V6.1
Annotation not available (402 aa)
   
   
  0.573
PP1S5942_1V6.1
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (108 aa)
   
        0.525
PP1S52_162V6.1
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (307 aa)
   
        0.525
PP1S336_13V6.1
Annotation not available (338 aa)
   
        0.525
PP1S7_75V6.1
Annotation not available (340 aa)
   
        0.521
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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