STRINGSTRING
PP1S407_33V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S407_33V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S407_33V6.1Annotation not available (1084 aa)    
Predicted Functional Partners:
PP1S58_120V6.1
Predicted protein (122 aa)
     
 
  0.927
PP1S163_26V6.2
Predicted protein (583 aa)
         
  0.776
PP1S80_97V6.1
Predicted protein (429 aa)
   
   
  0.605
PP1S63_119V6.1
Predicted protein (422 aa)
   
   
  0.605
PP1S54_48V6.2
Predicted protein (522 aa)
   
 
  0.605
PP1S8_113V6.1
Annotation not available (153 aa)
   
   
  0.591
PP1S377_35V6.1
Predicted protein (504 aa)
   
   
  0.591
PP1S311_79V6.2
Predicted protein (476 aa)
   
   
  0.591
PP1S118_234V6.1
Predicted protein (502 aa)
   
   
  0.591
PP1S246_9V6.1
Predicted protein (158 aa)
       
  0.582
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (7%) [HD]