• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S407_46V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S407_46V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S407_46V6.1Predicted protein (141 aa)    
Predicted Functional Partners:
PP1S395_51V6.3
Predicted protein (342 aa)
     
        0.875
PP1S194_36V6.1
annotation not available (319 aa)
     
        0.875
PP1S191_67V6.1
Predicted protein (231 aa)
     
   
  0.782
PP1S70_275V6.1
Predicted protein (241 aa)
       
      0.618
PP1S55_210V6.1
Predicted protein (265 aa)
       
      0.618
PP1S411_22V6.1
Predicted protein (269 aa)
       
      0.618
PP1S206_83V6.2
Predicted protein (365 aa)
           
  0.616
PP1S206_68V6.1
annotation not available (186 aa)
           
  0.616
PP1S7_156V6.1
Uncharacterized protein (424 aa)
           
  0.587
PP1S63_54V6.2
Predicted protein (423 aa)
           
  0.587
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (10%) [HD]