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STRINGSTRING
PP1S412_13V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S412_13V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S412_13V6.1Predicted protein; Belongs to the adaptor complexes medium subunit family (653 aa)    
Predicted Functional Partners:
PP1S86_52V6.1
Predicted protein (1094 aa)
     
 
  0.854
PP1S37_348V6.1
Predicted protein (1343 aa)
     
 
  0.854
PP1S231_64V6.1
annotation not available (240 aa)
     
 
  0.854
PP1S22_272V6.1
annotation not available (1005 aa)
     
 
  0.854
PP1S153_92V6.1
annotation not available (1082 aa)
     
 
  0.854
PP1S149_18V6.1
Predicted protein (1259 aa)
     
 
  0.854
PP1S22_359V6.1
Predicted protein (863 aa)
     
 
  0.847
PP1S164_60V6.2
annotation not available (622 aa)
       
 
  0.846
PP1S71_197V6.1
Formin-like protein; Belongs to the formin-like family (1081 aa)
     
 
  0.829
PP1S344_11V6.1
annotation not available (2091 aa)
     
 
  0.829
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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