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STRINGSTRING
PP1S414_2V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S414_2V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S414_2V6.1Predicted protein; Belongs to the peptidase M18 family (747 aa)    
Predicted Functional Partners:
PP1S381_15V6.1
annotation not available (585 aa)
   
   
  0.635
PP1S33_172V6.1
Predicted protein (623 aa)
   
   
  0.635
PP1S725_2V6.1
Alpha-mannosidase (633 aa)
     
 
  0.596
PP1S91_78V6.1
Predicted protein (473 aa)
   
   
  0.573
PP1S372_25V6.1
Predicted protein (358 aa)
   
   
  0.570
PP1S15_227V6.1
Predicted protein (410 aa)
   
   
  0.570
PP1S195_98V6.1
Predicted protein (500 aa)
     
   
  0.550
PP1S90_110V6.3
Predicted protein (894 aa)
     
   
  0.550
PP1S292_64V6.1
Aminopeptidase (755 aa)
     
   
  0.550
PP1S211_126V6.1
Predicted protein (896 aa)
     
   
  0.550
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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