STRINGSTRING
PP1S415_8V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S415_8V6.1" - Annotation not available in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S415_8V6.1Annotation not available (294 aa)    
Predicted Functional Partners:
HAG1502
RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase (569 aa)
     
 
  0.831
PP1S167_46V6.1
Annotation not available (552 aa)
     
 
  0.831
RUVBL1502
Predicted protein (1320 aa)
       
 
  0.803
PP1S35_271V6.1
Predicted protein; Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (1335 aa)
       
 
  0.754
PP1S238_51V6.1
Annotation not available (109 aa)
       
 
  0.630
PP1S142_26V6.1
Predicted protein (491 aa)
     
   
  0.480
PP1S105_57V6.1
Predicted protein (85 aa)
           
  0.469
PP1S42_174V6.1
Predicted protein (311 aa)
       
      0.452
PP1S31_299V6.1
Annotation not available (276 aa)
       
      0.452
PP1S229_29V6.1
Predicted protein (558 aa)
         
  0.450
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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