STRINGSTRING
PpLOX2 protein (Physcomitrella patens) - STRING interaction network
"PpLOX2" - Lipoxygenase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PpLOX2Lipoxygenase (938 aa)    
Predicted Functional Partners:
HPL1
Predicted protein (532 aa)
         
  0.945
PP1S97_112V6.1
Predicted protein (475 aa)
     
 
  0.906
PP1S38_330V6.1
Predicted protein (531 aa)
     
 
  0.906
PpLOX3
Lipoxygenase (920 aa)
         
0.903
PpLOX6
Lipoxygenase (956 aa)
         
0.902
PP1S159_20V6.1
Predicted protein (644 aa)
         
  0.902
PP1S563_4V6.1
Predicted protein (1226 aa)
         
    0.900
PP1S505_23V6.1
Predicted protein (315 aa)
         
 
0.900
PP1S42_235V6.1
Predicted protein (917 aa)
         
    0.900
PpLOX4
Lipoxygenase (967 aa)
         
 
0.900
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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