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STRINGSTRING
PP1S41_17V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S41_17V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S41_17V6.1Predicted protein (460 aa)    
Predicted Functional Partners:
PP1S47_172V6.1
Predicted protein (805 aa)
           
  0.744
PP1S446_8V6.1
annotation not available (373 aa)
       
      0.618
PP1S99_254V6.1
annotation not available (1775 aa)
     
   
  0.543
PP1S213_128V6.1
annotation not available (1773 aa)
     
   
  0.543
PP1S109_65V6.1
annotation not available (116 aa)
           
  0.526
PP1S109_63V6.1
annotation not available (1139 aa)
           
  0.526
PP1S109_62V6.1
annotation not available (1291 aa)
           
  0.526
PP1S387_34V6.1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family (590 aa)
           
  0.523
PP1S16_48V6.1
annotation not available (614 aa)
           
  0.523
PP1S61_8V6.1
Predicted protein (345 aa)
           
  0.519
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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